Gene detail information of Glyur000870s00029783.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26640.27.00E-45WRKY family transcription factor family protein
NRXP_006586119.11.72E-125PREDICTED: probable WRKY transcription factor 20 isoform X2 [Glycine max]
Swissprottr|Q93WV0|WRK20_ARATH2.00E-49Probable WRKY transcription factor 20
trEMBLtr|A7LHH5|A7LHH5_SOYBN4.00E-116WRKY35 {ECO:0000313|EMBL:ABS18434.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008706519670609-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000870s00029783.1PF03106.10WRKY2733116.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.259
SRR1783600control11.152
SRR1783602moderate drought stress13.773
SRR1811619moderate drought stress13.416

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.994
DRR006520Root Summer glycyrrhizin high producing strain12.898
DRR006521Root Winter glycyrrhizin high producing strain8.228
DRR006522Root Winter glycyrrhizin high producing strain7.752
DRR006523Root Summer glycyrrhizin low producing strain14.102
DRR006524Root Summer glycyrrhizin low producing strain14.406
DRR006525Leaf Summer glycyrrhizin high producing strain11.582
DRR006526Leaf Summer glycyrrhizin high producing strain11.079

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.843
SRR2868004Drought Stress(Tissue:root)16.226
SRR2967015Control (Tissue:root)19.552

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.440
SRR9715740Leave17.879
SRR9715741Leave16.654
SRR9715739Root4.022
SRR9715742Root13.135
SRR9715743Root12.578

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.852
SRR8749028MeJA induced 9h14.809
SRR8749029MeJA induced 9h6.607
SRR8749030Uninduced3.053
SRR8749031Uninduced0.937
SRR8749032Uninduced0.713

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.362
SRR8400027Control-Root19.550

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved