Gene detail information of Glyur000873s00032914.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G07160.15.00E-94glucan synthase-like 10
NRKGN66426.18.17E-135hypothetical protein Csa_1G604850 [Cucumis sativus]
Swissprottr|Q9SFU6|CALS9_ARATH3.00E-115Callose synthase 9
trEMBLtr|A0A0A0M2K8|A0A0A0M2K8_CUCSA3.00E-135Uncharacterized protein {ECO:0000313|EMBL:KGN66426.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008732809740745+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000873s00032914.1PF02364.10Glucan_synthase381983.40E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.150
SRR1783600control24.520
SRR1783602moderate drought stress26.017
SRR1811619moderate drought stress25.723

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.846
DRR006520Root Summer glycyrrhizin high producing strain27.232
DRR006521Root Winter glycyrrhizin high producing strain25.666
DRR006522Root Winter glycyrrhizin high producing strain25.343
DRR006523Root Summer glycyrrhizin low producing strain29.401
DRR006524Root Summer glycyrrhizin low producing strain29.469
DRR006525Leaf Summer glycyrrhizin high producing strain11.895
DRR006526Leaf Summer glycyrrhizin high producing strain11.854

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)74.724
SRR2868004Drought Stress(Tissue:root)87.749
SRR2967015Control (Tissue:root)85.074

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.149
SRR9715740Leave31.995
SRR9715741Leave36.505
SRR9715739Root14.280
SRR9715742Root45.943
SRR9715743Root40.658

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.990
SRR8749028MeJA induced 9h41.607
SRR8749029MeJA induced 9h37.549
SRR8749030Uninduced23.493
SRR8749031Uninduced29.408
SRR8749032Uninduced22.985

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root63.932
SRR8400027Control-Root72.705

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved