Gene detail information of Glyur000875s00029461.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38260.12.00E-56Protein kinase superfamily protein
NRXP_003624367.10Ser/Thr protein kinase [Medicago truncatula]
COGYP_001958461.19.00E-08hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH3.00E-59Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|G7KUD5|G7KUD5_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES80585.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00875904413821-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000875s00029461.1PF14380.1WAK_assoc1722511.50E-17
Glyur000875s00029461.1PF07714.12Pkinase_Tyr3354422.00E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.193
SRR1783600control0.247
SRR1783602moderate drought stress0.110
SRR1811619moderate drought stress0.089

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.027
DRR006520Root Summer glycyrrhizin high producing strain1.975
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain5.375
DRR006524Root Summer glycyrrhizin low producing strain5.553
DRR006525Leaf Summer glycyrrhizin high producing strain0.926
DRR006526Leaf Summer glycyrrhizin high producing strain0.749

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.266
SRR2868004Drought Stress(Tissue:root)11.947
SRR2967015Control (Tissue:root)7.870

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.037
SRR9715740Leave6.376
SRR9715741Leave11.631
SRR9715739Root4.156
SRR9715742Root8.049
SRR9715743Root6.964

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.247
SRR8749028MeJA induced 9h12.989
SRR8749029MeJA induced 9h9.791
SRR8749030Uninduced15.301
SRR8749031Uninduced17.722
SRR8749032Uninduced8.753

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.484
SRR8400027Control-Root6.940

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved