Gene detail information of Glyur000877s00023933.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G14170.10aldehyde dehydrogenase 6B2
NRXP_003531010.10PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like isoform X1 [Glycine max]
COGNP_522211.10methylmalonate-semialdehyde dehydrogenase oxidoreductase [Ralstonia solanacearum GMI1000]
Swissprottr|Q0WM29|MMSA_ARATH0Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (Precursor)
trEMBLtr|I1KQX0|I1KQX0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G07110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008775607167423-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00140mmsA, iolA, ALDH6A1 EC:1.2.1.18 1.2.1.27 Carbon metabolism map01200
Propanoate metabolismmap00640
Inositol phosphate metabolismmap00562
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004491  methylmalonate-semialdehyde dehydrogenase (acylating) activity

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000877s00023933.2PF00171.17Aldedh413612.60E-90
Glyur000877s00023933.2PF00171.17Aldedh3864582.00E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.898
SRR1783600control14.739
SRR1783602moderate drought stress15.261
SRR1811619moderate drought stress15.084

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.358
DRR006520Root Summer glycyrrhizin high producing strain32.769
DRR006521Root Winter glycyrrhizin high producing strain13.474
DRR006522Root Winter glycyrrhizin high producing strain13.224
DRR006523Root Summer glycyrrhizin low producing strain30.841
DRR006524Root Summer glycyrrhizin low producing strain30.694
DRR006525Leaf Summer glycyrrhizin high producing strain15.844
DRR006526Leaf Summer glycyrrhizin high producing strain15.917

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.719
SRR2868004Drought Stress(Tissue:root)33.543
SRR2967015Control (Tissue:root)33.755

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.122
SRR9715740Leave16.782
SRR9715741Leave19.547
SRR9715739Root12.255
SRR9715742Root19.058
SRR9715743Root17.581

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.450
SRR8749028MeJA induced 9h31.453
SRR8749029MeJA induced 9h37.075
SRR8749030Uninduced43.685
SRR8749031Uninduced53.497
SRR8749032Uninduced52.083

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.413
SRR8400027Control-Root23.219

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved