Gene detail information of Glyur000877s00023936.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10530.11.00E-144Concanavalin A-like lectin protein kinase family protein
NRXP_004504938.10PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
COGYP_001543675.12.00E-24serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9LXA5|LRK91_ARATH0L-type lectin-domain containing receptor kinase IX.1 (Precursor)
trEMBLtr|I1KL69|I1KL69_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G30260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008777786885168-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000877s00023936.1PF00139.14Lectin_legB172572.80E-50
Glyur000877s00023936.1PF00069.20Pkinase3656303.40E-49
Glyur000877s00023936.1PF00139.14Lectin_legB7439718.50E-45
Glyur000877s00023936.1PF00069.20Pkinase104912611.30E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.460
SRR1783600control0.464
SRR1783602moderate drought stress0.257
SRR1811619moderate drought stress0.272

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.328
DRR006520Root Summer glycyrrhizin high producing strain0.359
DRR006521Root Winter glycyrrhizin high producing strain0.075
DRR006522Root Winter glycyrrhizin high producing strain0.086
DRR006523Root Summer glycyrrhizin low producing strain0.219
DRR006524Root Summer glycyrrhizin low producing strain0.212
DRR006525Leaf Summer glycyrrhizin high producing strain0.708
DRR006526Leaf Summer glycyrrhizin high producing strain0.619

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.412
SRR2868004Drought Stress(Tissue:root)8.873
SRR2967015Control (Tissue:root)6.317

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.722
SRR9715740Leave2.346
SRR9715741Leave7.249
SRR9715739Root1.226
SRR9715742Root1.942
SRR9715743Root2.104

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.893
SRR8749028MeJA induced 9h11.530
SRR8749029MeJA induced 9h13.156
SRR8749030Uninduced30.500
SRR8749031Uninduced38.943
SRR8749032Uninduced13.731

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.028
SRR8400027Control-Root2.635

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved