Gene detail information of Glyur000877s00023940.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24270.34.00E-52aldehyde dehydrogenase 11A3
NRKCW80287.18.24E-66hypothetical protein EUGRSUZ_C016461, partial [Eucalyptus grandis]
COGNP_350239.12.00E-30NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Clostridium acetobutylicum ATCC 824]
Swissprottr|P81406|GAPN_PEA8.00E-66NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
trEMBLtr|A0A059CP94|A0A059CP94_EUCGR3.00E-66Uncharacterized protein {ECO:0000313|EMBL:KCW80288.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00877107149108987+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00131gapN EC:1.2.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000877s00023940.1PF00171.17Aldedh571669.00E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.398
SRR1783600control2.759
SRR1783602moderate drought stress20.288
SRR1811619moderate drought stress21.445

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.002
DRR006520Root Summer glycyrrhizin high producing strain10.146
DRR006521Root Winter glycyrrhizin high producing strain65.412
DRR006522Root Winter glycyrrhizin high producing strain64.416
DRR006523Root Summer glycyrrhizin low producing strain1.912
DRR006524Root Summer glycyrrhizin low producing strain0.924
DRR006525Leaf Summer glycyrrhizin high producing strain10.463
DRR006526Leaf Summer glycyrrhizin high producing strain10.026

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.069
SRR2868004Drought Stress(Tissue:root)0.229
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.775
SRR9715740Leave6.986
SRR9715741Leave6.972
SRR9715739Root1.039
SRR9715742Root3.597
SRR9715743Root2.162

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.019
SRR8749029MeJA induced 9h0.017
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.979
SRR8400027Control-Root13.149

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved