Gene detail information of Glyur000880s00024786.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15860.18.00E-50prenylcysteine methylesterase
NRXP_004514435.18.58E-78PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME-like [Cicer arietinum]
COGYP_003371043.14.00E-07alpha/beta hydrolase [Pirellula staleyi DSM 6068]
Swissprottr|Q94AS5|ICME_ARATH2.00E-59Isoprenylcysteine alpha-carbonyl methylesterase ICME
trEMBLtr|I3SZG5|I3SZG5_MEDTR1.00E-77Uncharacterized protein {ECO:0000313|EMBL:AFK45657.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008805587962239-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15889PCME EC:3.1.1.- Terpenoid backbone biosynthesis map00900


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008236  serine-type peptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000880s00024786.1PF00326.16Peptidase_S928751.50E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.476
SRR1783600control12.601
SRR1783602moderate drought stress8.383
SRR1811619moderate drought stress8.125

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.144
DRR006520Root Summer glycyrrhizin high producing strain7.932
DRR006521Root Winter glycyrrhizin high producing strain3.807
DRR006522Root Winter glycyrrhizin high producing strain3.596
DRR006523Root Summer glycyrrhizin low producing strain10.004
DRR006524Root Summer glycyrrhizin low producing strain10.249
DRR006525Leaf Summer glycyrrhizin high producing strain17.877
DRR006526Leaf Summer glycyrrhizin high producing strain17.694

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.784
SRR2868004Drought Stress(Tissue:root)8.030
SRR2967015Control (Tissue:root)5.590

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.033
SRR9715740Leave23.357
SRR9715741Leave29.418
SRR9715739Root3.801
SRR9715742Root5.428
SRR9715743Root5.165

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.027
SRR8749028MeJA induced 9h14.329
SRR8749029MeJA induced 9h16.079
SRR8749030Uninduced28.532
SRR8749031Uninduced17.289
SRR8749032Uninduced16.767

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.824
SRR8400027Control-Root12.751

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved