Gene detail information of Glyur000880s00024795.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15870.10glycosyl hydrolase family 81 protein
NRXP_003555070.20PREDICTED: endo-1,3(4)-beta-glucanase 1-like [Glycine max]
COGYP_008154648.15.00E-108hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2]
trEMBLtr|K7MWG8|K7MWG8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G05550.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0088098556100796-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH81


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0016998  cell wall macromolecule catabolic process


molecular_function

GO:0052861  glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group

GO:0052862  glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000880s00024795.1PF03639.8Glyco_hydro_81747261.90E-215


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.921
SRR1783600control19.400
SRR1783602moderate drought stress19.017
SRR1811619moderate drought stress18.638

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.421
DRR006520Root Summer glycyrrhizin high producing strain25.338
DRR006521Root Winter glycyrrhizin high producing strain11.447
DRR006522Root Winter glycyrrhizin high producing strain11.240
DRR006523Root Summer glycyrrhizin low producing strain21.679
DRR006524Root Summer glycyrrhizin low producing strain21.208
DRR006525Leaf Summer glycyrrhizin high producing strain9.893
DRR006526Leaf Summer glycyrrhizin high producing strain9.719

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.318
SRR2868004Drought Stress(Tissue:root)29.213
SRR2967015Control (Tissue:root)28.051

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.113
SRR9715740Leave5.815
SRR9715741Leave6.654
SRR9715739Root25.317
SRR9715742Root32.017
SRR9715743Root31.287

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.633
SRR8749028MeJA induced 9h20.917
SRR8749029MeJA induced 9h8.793
SRR8749030Uninduced5.176
SRR8749031Uninduced1.191
SRR8749032Uninduced1.462

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.962
SRR8400027Control-Root28.108

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved