Gene detail information of Glyur000880s00024797.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15870.1 | 0 | glycosyl hydrolase family 81 protein |
| NR | XP_003555070.2 | 0 | PREDICTED: endo-1,3(4)-beta-glucanase 1-like [Glycine max] |
| COG | YP_008154648.1 | 6.00E-99 | hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2] |
| trEMBL | tr|K7MWG8|K7MWG8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G05550.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00880 | 105022 | 107079 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH81 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000880s00024797.1 | PF03639.8 | Glyco_hydro_81 | 6 | 109 | 1.70E-21 |
| Glyur000880s00024797.1 | PF03639.8 | Glyco_hydro_81 | 124 | 618 | 1.30E-159 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.223 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.166 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.785 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.412 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.424 |
| SRR2967015 | Control (Tissue:root) | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.009 |
| SRR9715742 | Root | 0.007 |
| SRR9715743 | Root | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.006 |
| SRR8749032 | Uninduced | 0.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.004 |
| SRR8400027 | Control-Root | 0.022 |