Gene detail information of Glyur000882s00021656.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11320.2 | 7.00E-29 | Flavin-binding monooxygenase family protein |
| NR | XP_003527797.1 | 1.62E-37 | PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4-like [Glycine max] |
| COG | YP_557453.1 | 4.00E-06 | cyclohexanone monooxygenase [Burkholderia xenovorans LB400] |
| Swissprot | tr|Q9LFM5|YUC4_ARATH | 3.00E-33 | Probable indole-3-pyruvate monooxygenase YUCCA4 |
| trEMBL | tr|I1K8Z1|I1K8Z1_SOYBN | 6.00E-38 | Flavin-containing monooxygenase {ECO:0000256|RuleBase:RU361177} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00882 | 37924 | 38608 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11816 | YUCCA | EC:1.14.13.168 | Tryptophan metabolism | map00380 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.170 |
| SRR1783600 | control | 0.036 |
| SRR1783602 | moderate drought stress | 0.874 |
| SRR1811619 | moderate drought stress | 1.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.005 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.315 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.099 |
| SRR9715740 | Leave | 0.375 |
| SRR9715741 | Leave | 0.342 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.179 |
| SRR9715743 | Root | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.050 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.444 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.571 |
| SRR8400027 | Control-Root | 2.244 |