Gene detail information of Glyur000882s00021659.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G15550.15.00E-82gibberellin 3-oxidase 1
NRXP_003527798.10PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Glycine max]
COGYP_007565700.12.00E-24putative oxidoreductase [Ilumatobacter coccineus YM16-304]
Swissprottr|O24648|G3OX_PEA8.00E-115Gibberellin 3-beta-dioxygenase 1
trEMBLtr|I1K8Z6|I1K8Z6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G07630.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008827234074699-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04124E1.14.11.15 EC:1.14.11.15 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000882s00021659.1PF14226.1DIOX_N571582.30E-22
Glyur000882s00021659.1PF03171.152OG-FeII_Oxy2233307.80E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.933
SRR1783600control2.129
SRR1783602moderate drought stress2.311
SRR1811619moderate drought stress2.215

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.583
DRR006520Root Summer glycyrrhizin high producing strain2.417
DRR006521Root Winter glycyrrhizin high producing strain15.944
DRR006522Root Winter glycyrrhizin high producing strain16.182
DRR006523Root Summer glycyrrhizin low producing strain2.022
DRR006524Root Summer glycyrrhizin low producing strain2.110
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.224
SRR2868004Drought Stress(Tissue:root)0.475
SRR2967015Control (Tissue:root)0.217

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.165
SRR9715740Leave0.000
SRR9715741Leave0.448
SRR9715739Root0.603
SRR9715742Root0.327
SRR9715743Root0.650

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.022
SRR8749028MeJA induced 9h0.390
SRR8749029MeJA induced 9h0.037
SRR8749030Uninduced0.037
SRR8749031Uninduced0.093
SRR8749032Uninduced0.077

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.332
SRR8400027Control-Root0.131

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved