Gene detail information of Glyur000882s00021661.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32570.1 | 1.00E-38 | TIFY domain protein 8 |
| NR | XP_004501285.1 | 0 | PREDICTED: protein TIFY 8-like [Cicer arietinum] |
| Swissprot | tr|Q84MB2|TIF8_ARATH | 2.00E-51 | Protein TIFY 8 |
| trEMBL | tr|I1JUH9|I1JUH9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G07530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00882 | 83586 | 87785 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Tify |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000882s00021661.1 | PF06200.9 | tify | 291 | 323 | 1.60E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.063 |
| SRR1783600 | control | 108.653 |
| SRR1783602 | moderate drought stress | 92.811 |
| SRR1811619 | moderate drought stress | 92.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.795 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 71.814 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.585 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.301 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.159 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 62.611 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.426 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 52.952 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.755 |
| SRR2967015 | Control (Tissue:root) | 38.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.867 |
| SRR9715740 | Leave | 6.616 |
| SRR9715741 | Leave | 6.448 |
| SRR9715739 | Root | 69.309 |
| SRR9715742 | Root | 54.484 |
| SRR9715743 | Root | 54.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 83.478 |
| SRR8749028 | MeJA induced 9h | 57.719 |
| SRR8749029 | MeJA induced 9h | 56.022 |
| SRR8749030 | Uninduced | 43.623 |
| SRR8749031 | Uninduced | 18.579 |
| SRR8749032 | Uninduced | 32.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 66.916 |
| SRR8400027 | Control-Root | 61.661 |