Gene detail information of Glyur000888s00023083.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11050.10Protein kinase superfamily protein
NRKEH36425.10cysteine-rich RLK (receptor-like kinase) protein [Medicago truncatula]
COGYP_284821.15.00E-21protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprottr|O04086|Y1105_ARATH0Probable receptor-like protein kinase At1g11050 (Precursor)
trEMBLtr|A0A072VE54|A0A072VE54_MEDTR0Cysteine-rich RLK (Receptor-like kinase) protein {ECO:0000313|EMBL:KEH36425.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008886986671812-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000888s00023083.1PF00069.20Pkinase3055232.10E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.626
SRR1783600control29.703
SRR1783602moderate drought stress42.957
SRR1811619moderate drought stress41.893

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.345
DRR006520Root Summer glycyrrhizin high producing strain46.848
DRR006521Root Winter glycyrrhizin high producing strain34.331
DRR006522Root Winter glycyrrhizin high producing strain33.356
DRR006523Root Summer glycyrrhizin low producing strain109.098
DRR006524Root Summer glycyrrhizin low producing strain108.771
DRR006525Leaf Summer glycyrrhizin high producing strain21.437
DRR006526Leaf Summer glycyrrhizin high producing strain21.079

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.440
SRR2868004Drought Stress(Tissue:root)57.800
SRR2967015Control (Tissue:root)62.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave34.234
SRR9715740Leave28.472
SRR9715741Leave33.670
SRR9715739Root46.371
SRR9715742Root121.440
SRR9715743Root102.914

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.401
SRR8749028MeJA induced 9h45.150
SRR8749029MeJA induced 9h10.616
SRR8749030Uninduced19.335
SRR8749031Uninduced17.157
SRR8749032Uninduced9.129

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.968
SRR8400027Control-Root34.599

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved