Gene detail information of Glyur000890s00019082.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04940.24.00E-177SU(VAR)3-9 homolog 1
NRXP_004516550.10PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like isoform X1 [Cicer arietinum]
COGNP_295256.18.00E-19hypothetical protein DR_1533 [Deinococcus radiodurans R1]
Swissprottr|Q9FF80|SUVH1_ARATH0Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
trEMBLtr|I1M0I3|I1M0I3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G25640.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008906160168210+


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11420EHMT EC:2.1.1.43 Lysine degradation map00310
Longevity regulating pathway - mammalmap04211


Gene Ontology

biological_process

GO:0016571  histone methylation

GO:0034968  histone lysine methylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding

GO:0018024  histone-lysine N-methyltransferase activity

GO:0042393  histone binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000890s00019082.1PF02182.12SAD_SRA2103659.20E-54
Glyur000890s00019082.1PF05033.11Pre-SET3924926.60E-19
Glyur000890s00019082.1PF00856.23SET5116463.20E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.293
SRR1783600control5.267
SRR1783602moderate drought stress6.042
SRR1811619moderate drought stress5.939

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.979
DRR006520Root Summer glycyrrhizin high producing strain9.222
DRR006521Root Winter glycyrrhizin high producing strain7.038
DRR006522Root Winter glycyrrhizin high producing strain6.351
DRR006523Root Summer glycyrrhizin low producing strain8.150
DRR006524Root Summer glycyrrhizin low producing strain7.892
DRR006525Leaf Summer glycyrrhizin high producing strain7.399
DRR006526Leaf Summer glycyrrhizin high producing strain7.504

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.001
SRR2868004Drought Stress(Tissue:root)16.551
SRR2967015Control (Tissue:root)18.530

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.869
SRR9715740Leave9.886
SRR9715741Leave7.948
SRR9715739Root1.088
SRR9715742Root5.243
SRR9715743Root4.652

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.402
SRR8749028MeJA induced 9h9.328
SRR8749029MeJA induced 9h5.697
SRR8749030Uninduced8.199
SRR8749031Uninduced7.661
SRR8749032Uninduced4.938

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.018
SRR8400027Control-Root10.974

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved