Gene detail information of Glyur000894s00023634.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09020.10homolog of yeast sucrose nonfermenting 4
NRXP_003546378.10PREDICTED: sucrose nonfermenting 4-like protein-like isoform X1 [Glycine max]
COGYP_001741050.13.00E-07putative Cyclomaltodextrinase [Candidatus Cloacimonas acidaminovorans str. Evry]
Swissprottr|Q944A6|SNF4_ARATH0Sucrose nonfermenting 4-like protein
trEMBLtr|I1MGR7|I1MGR7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G16510.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008945040757564+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000894s00023634.2PF00571.23CBS2803360.0001
Glyur000894s00023634.2PF00571.23CBS3704150.00012
Glyur000894s00023634.2PF00571.23CBS4535028.90E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.154
SRR1783600control21.214
SRR1783602moderate drought stress19.477
SRR1811619moderate drought stress19.371

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.071
DRR006520Root Summer glycyrrhizin high producing strain22.618
DRR006521Root Winter glycyrrhizin high producing strain14.744
DRR006522Root Winter glycyrrhizin high producing strain14.543
DRR006523Root Summer glycyrrhizin low producing strain21.654
DRR006524Root Summer glycyrrhizin low producing strain21.800
DRR006525Leaf Summer glycyrrhizin high producing strain13.475
DRR006526Leaf Summer glycyrrhizin high producing strain13.571

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.347
SRR2868004Drought Stress(Tissue:root)35.843
SRR2967015Control (Tissue:root)34.733

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.875
SRR9715740Leave22.665
SRR9715741Leave24.652
SRR9715739Root8.580
SRR9715742Root20.354
SRR9715743Root17.453

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.389
SRR8749028MeJA induced 9h37.555
SRR8749029MeJA induced 9h26.510
SRR8749030Uninduced33.866
SRR8749031Uninduced25.989
SRR8749032Uninduced27.750

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.277
SRR8400027Control-Root32.385

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved