Gene detail information of Glyur000897s00031606.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54010.1 | 1.00E-65 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003540412.2 | 1.36E-155 | PREDICTED: anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Glycine max] |
| Swissprot | tr|Q53UH5|DUSKY_IPOPU | 6.00E-102 | Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase |
| trEMBL | tr|E9M5F1|E9M5F1_PUEML | 1.00E-155 | Glycosyltransferase GT10J15 {ECO:0000313|EMBL:ADV71366.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00897 | 43411 | 56414 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000897s00031606.2 | PF00201.13 | UDPGT | 267 | 352 | 3.50E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.803 |
| SRR1783600 | control | 20.306 |
| SRR1783602 | moderate drought stress | 83.702 |
| SRR1811619 | moderate drought stress | 98.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.933 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.155 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.151 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.035 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 63.565 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.664 |
| SRR2967015 | Control (Tissue:root) | 23.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.446 |
| SRR9715740 | Leave | 27.674 |
| SRR9715741 | Leave | 4.440 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 44.642 |
| SRR9715743 | Root | 7.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.681 |
| SRR8749028 | MeJA induced 9h | 49.884 |
| SRR8749029 | MeJA induced 9h | 1.003 |
| SRR8749030 | Uninduced | 3.318 |
| SRR8749031 | Uninduced | 1.211 |
| SRR8749032 | Uninduced | 3.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 30.936 |
| SRR8400027 | Control-Root | 29.968 |