Gene detail information of Glyur000899s00033733.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G46920.13.00E-168Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NRXP_004514063.10PREDICTED: uncharacterized protein LOC101492288 isoform X1 [Cicer arietinum]
COGYP_001958461.17.00E-31hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH6.00E-51Serine/threonine-protein kinase CTR1
trEMBLtr|K7MCM1|K7MCM1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G24120.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold008998348892187+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000899s00033733.1PF00564.19PB12072933.00E-18
Glyur000899s00033733.1PF07714.12Pkinase_Tyr112313821.40E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.650
SRR1783600control1.583
SRR1783602moderate drought stress4.379
SRR1811619moderate drought stress4.333

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.192
DRR006520Root Summer glycyrrhizin high producing strain2.395
DRR006521Root Winter glycyrrhizin high producing strain8.650
DRR006522Root Winter glycyrrhizin high producing strain8.360
DRR006523Root Summer glycyrrhizin low producing strain4.398
DRR006524Root Summer glycyrrhizin low producing strain4.087
DRR006525Leaf Summer glycyrrhizin high producing strain2.684
DRR006526Leaf Summer glycyrrhizin high producing strain2.713

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.242
SRR2868004Drought Stress(Tissue:root)9.639
SRR2967015Control (Tissue:root)11.770

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.217
SRR9715740Leave0.488
SRR9715741Leave1.812
SRR9715739Root0.815
SRR9715742Root4.289
SRR9715743Root4.246

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.186
SRR8749028MeJA induced 9h6.374
SRR8749029MeJA induced 9h5.468
SRR8749030Uninduced3.673
SRR8749031Uninduced2.506
SRR8749032Uninduced1.342

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.768
SRR8400027Control-Root7.239

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved