Gene detail information of Glyur000900s00031455.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58640.20Mitogen activated protein kinase kinase kinase-related
NRXP_004487152.10PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum]
COGYP_828710.17.00E-21serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q05609|CTR1_ARATH7.00E-27Serine/threonine-protein kinase CTR1
trEMBLtr|G7IU31|G7IU31_MEDTR0MAP kinase kinase kinase-like protein {ECO:0000313|EMBL:AES67381.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009008134796470-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000900s00031455.2PF14381.1EDR1612771.20E-53
Glyur000900s00031455.2PF00069.20Pkinase5867341.60E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.378
SRR1783600control21.348
SRR1783602moderate drought stress9.927
SRR1811619moderate drought stress10.173

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.239
DRR006520Root Summer glycyrrhizin high producing strain10.237
DRR006521Root Winter glycyrrhizin high producing strain7.250
DRR006522Root Winter glycyrrhizin high producing strain7.565
DRR006523Root Summer glycyrrhizin low producing strain20.553
DRR006524Root Summer glycyrrhizin low producing strain20.812
DRR006525Leaf Summer glycyrrhizin high producing strain4.944
DRR006526Leaf Summer glycyrrhizin high producing strain4.831

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.148
SRR2868004Drought Stress(Tissue:root)14.889
SRR2967015Control (Tissue:root)12.238

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.407
SRR9715740Leave10.090
SRR9715741Leave12.277
SRR9715739Root4.999
SRR9715742Root15.032
SRR9715743Root13.341

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.822
SRR8749028MeJA induced 9h13.048
SRR8749029MeJA induced 9h7.882
SRR8749030Uninduced7.920
SRR8749031Uninduced2.468
SRR8749032Uninduced2.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.531
SRR8400027Control-Root18.873

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved