Gene detail information of Glyur000902s00028773.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G25930.19.00E-99Protein kinase family protein with leucine-rich repeat domain
NRXP_003549165.10PREDICTED: receptor-like protein kinase HSL1-like [Glycine max]
COGYP_004775215.12.00E-55RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O82318|Y2579_ARATH7.00E-70Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (Precursor)
trEMBLtr|K7MIT5|K7MIT5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G33580.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009023685940262+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000902s00028773.1PF08263.7LRRNT_239751.10E-06
Glyur000902s00028773.1PF13516.1LRR_61261450.45
Glyur000902s00028773.1PF00560.28LRR_11531750.84
Glyur000902s00028773.1PF00560.28LRR_12532720.26
Glyur000902s00028773.1PF00560.28LRR_12993210.15
Glyur000902s00028773.1PF07714.12Pkinase_Tyr4565528.60E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.303
SRR1783600control2.261
SRR1783602moderate drought stress2.371
SRR1811619moderate drought stress2.558

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.376
DRR006520Root Summer glycyrrhizin high producing strain2.205
DRR006521Root Winter glycyrrhizin high producing strain2.923
DRR006522Root Winter glycyrrhizin high producing strain2.433
DRR006523Root Summer glycyrrhizin low producing strain2.758
DRR006524Root Summer glycyrrhizin low producing strain3.008
DRR006525Leaf Summer glycyrrhizin high producing strain2.067
DRR006526Leaf Summer glycyrrhizin high producing strain2.443

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.046
SRR2868004Drought Stress(Tissue:root)40.558
SRR2967015Control (Tissue:root)32.450

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.953
SRR9715740Leave11.994
SRR9715741Leave22.271
SRR9715739Root2.209
SRR9715742Root9.128
SRR9715743Root8.280

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.284
SRR8749028MeJA induced 9h107.160
SRR8749029MeJA induced 9h27.119
SRR8749030Uninduced24.585
SRR8749031Uninduced73.404
SRR8749032Uninduced33.092

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.106
SRR8400027Control-Root8.836

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved