Gene detail information of Glyur000902s00028777.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24760.12.00E-124GroES-like zinc-binding dehydrogenase family protein
NRXP_004512682.12.46E-177PREDICTED: alcohol dehydrogenase-like 6-like [Cicer arietinum]
COGYP_003147226.13.00E-78S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
Swissprottr|Q8LEB2|ADHL6_ARATH1.00E-152Alcohol dehydrogenase-like 6
trEMBLtr|V7C2X6|V7C2X6_PHAVU1.00E-177Uncharacterized protein {ECO:0000313|EMBL:ESW24509.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009025565363940+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00001E1.1.1.1, adh EC:1.1.1.1 Degradation of aromatic compounds map01220
Glycolysis / Gluconeogenesismap00010
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000902s00028777.1PF08240.7ADH_N1742744.10E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.299
SRR1783600control2.128
SRR1783602moderate drought stress1.220
SRR1811619moderate drought stress1.238

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.332
DRR006520Root Summer glycyrrhizin high producing strain1.202
DRR006521Root Winter glycyrrhizin high producing strain0.234
DRR006522Root Winter glycyrrhizin high producing strain0.255
DRR006523Root Summer glycyrrhizin low producing strain3.752
DRR006524Root Summer glycyrrhizin low producing strain3.705
DRR006525Leaf Summer glycyrrhizin high producing strain1.707
DRR006526Leaf Summer glycyrrhizin high producing strain1.535

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.717
SRR2868004Drought Stress(Tissue:root)16.154
SRR2967015Control (Tissue:root)16.408

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.624
SRR9715740Leave2.678
SRR9715741Leave1.835
SRR9715739Root0.563
SRR9715742Root1.629
SRR9715743Root1.911

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.333
SRR8749028MeJA induced 9h4.933
SRR8749029MeJA induced 9h4.353
SRR8749030Uninduced5.019
SRR8749031Uninduced3.991
SRR8749032Uninduced2.782

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.812
SRR8400027Control-Root10.726

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved