Gene detail information of Glyur000904s00024077.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10240.10asparagine synthetase 3
NRXP_004502424.10PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 3-like [Cicer arietinum]
COGYP_662517.10asparagine synthetase B [Pseudoalteromonas atlantica T6c]
Swissprottr|Q9LFU1|ASNS3_ARATH0Asparagine synthetase [glutamine-hydrolyzing] 3
trEMBLtr|G7J3R9|G7J3R9_MEDTR0Asparagine synthetase {ECO:0000256|PIRNR:PIRNR001589}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009047689282841-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01953asnB, ASNS EC:6.3.5.4 Alanine, aspartate and glutamate metabolism map00250


Gene Ontology

biological_process

GO:0006529  asparagine biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0004066  asparagine synthase (glutamine-hydrolyzing) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000904s00024077.1PF13537.1GATase_7481654.20E-42
Glyur000904s00024077.1PF00733.16Asn_synthase2214543.30E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.621
SRR1783600control28.733
SRR1783602moderate drought stress24.335
SRR1811619moderate drought stress24.042

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.271
DRR006520Root Summer glycyrrhizin high producing strain27.628
DRR006521Root Winter glycyrrhizin high producing strain25.848
DRR006522Root Winter glycyrrhizin high producing strain24.283
DRR006523Root Summer glycyrrhizin low producing strain26.360
DRR006524Root Summer glycyrrhizin low producing strain26.532
DRR006525Leaf Summer glycyrrhizin high producing strain21.415
DRR006526Leaf Summer glycyrrhizin high producing strain20.915

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.257
SRR2868004Drought Stress(Tissue:root)20.200
SRR2967015Control (Tissue:root)21.635

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.546
SRR9715740Leave13.069
SRR9715741Leave20.023
SRR9715739Root12.927
SRR9715742Root25.528
SRR9715743Root25.027

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.853
SRR8749028MeJA induced 9h75.251
SRR8749029MeJA induced 9h67.608
SRR8749030Uninduced106.763
SRR8749031Uninduced105.078
SRR8749032Uninduced76.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.286
SRR8400027Control-Root37.442

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved