Gene detail information of Glyur000906s00028230.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G25930.11.00E-177Protein kinase family protein with leucine-rich repeat domain
NRXP_004513050.10PREDICTED: receptor-like protein kinase HSL1-like [Cicer arietinum]
COGYP_004775215.16.00E-57RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH2.00E-144Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|I1J4I6|I1J4I6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00906711723583+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000906s00028230.1PF08263.7LRRNT_234741.40E-06
Glyur000906s00028230.1PF13855.1LRR_81031612.50E-07
Glyur000906s00028230.1PF00560.28LRR_12512700.83
Glyur000906s00028230.1PF00560.28LRR_12973190.0076
Glyur000906s00028230.1PF00560.28LRR_15355570.32
Glyur000906s00028230.1PF13516.1LRR_65785931.7
Glyur000906s00028230.1PF00069.20Pkinase6997945.30E-13
Glyur000906s00028230.1PF08263.7LRRNT_29279642.90E-06
Glyur000906s00028230.1PF13855.1LRR_899210502.70E-07
Glyur000906s00028230.1PF00560.28LRR_1118512070.2
Glyur000906s00028230.1PF13516.1LRR_6142214430.37
Glyur000906s00028230.1PF00560.28LRR_1146814890.57
Glyur000906s00028230.1PF00069.20Pkinase158716889.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.253
SRR1783600control1.277
SRR1783602moderate drought stress0.875
SRR1811619moderate drought stress0.903

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.315
DRR006520Root Summer glycyrrhizin high producing strain1.355
DRR006521Root Winter glycyrrhizin high producing strain2.765
DRR006522Root Winter glycyrrhizin high producing strain2.607
DRR006523Root Summer glycyrrhizin low producing strain3.501
DRR006524Root Summer glycyrrhizin low producing strain3.325
DRR006525Leaf Summer glycyrrhizin high producing strain4.104
DRR006526Leaf Summer glycyrrhizin high producing strain3.896

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.684
SRR2868004Drought Stress(Tissue:root)7.188
SRR2967015Control (Tissue:root)4.186

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.402
SRR9715740Leave9.390
SRR9715741Leave14.331
SRR9715739Root1.753
SRR9715742Root9.676
SRR9715743Root8.687

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.105
SRR8749028MeJA induced 9h4.425
SRR8749029MeJA induced 9h1.201
SRR8749030Uninduced6.884
SRR8749031Uninduced5.497
SRR8749032Uninduced3.338

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.830
SRR8400027Control-Root3.366

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved