Gene detail information of Glyur000906s00028232.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G25930.10Protein kinase family protein with leucine-rich repeat domain
NRXP_003516786.20PREDICTED: receptor-like protein kinase 5-like [Glycine max]
COGYP_004775215.16.00E-49RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P47735|RLK5_ARATH2.00E-144Receptor-like protein kinase 5 (Precursor)
trEMBLtr|I1J4I5|I1J4I5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01080.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009062361027316+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000906s00028232.1PF08263.7LRRNT_229671.00E-05
Glyur000906s00028232.1PF00560.28LRR_11181390.081
Glyur000906s00028232.1PF13516.1LRR_62312480.81
Glyur000906s00028232.1PF00560.28LRR_12772990.0039
Glyur000906s00028232.1PF13855.1LRR_84765346.40E-08
Glyur000906s00028232.1PF00069.20Pkinase5856597.30E-06
Glyur000906s00028232.1PF00069.20Pkinase6688109.40E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.538
SRR1783600control13.428
SRR1783602moderate drought stress10.443
SRR1811619moderate drought stress10.283

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.010
DRR006520Root Summer glycyrrhizin high producing strain6.900
DRR006521Root Winter glycyrrhizin high producing strain21.967
DRR006522Root Winter glycyrrhizin high producing strain20.878
DRR006523Root Summer glycyrrhizin low producing strain15.516
DRR006524Root Summer glycyrrhizin low producing strain15.732
DRR006525Leaf Summer glycyrrhizin high producing strain5.228
DRR006526Leaf Summer glycyrrhizin high producing strain5.259

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.327
SRR2868004Drought Stress(Tissue:root)35.166
SRR2967015Control (Tissue:root)28.515

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.621
SRR9715740Leave3.228
SRR9715741Leave8.068
SRR9715739Root3.162
SRR9715742Root13.466
SRR9715743Root11.894

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.816
SRR8749028MeJA induced 9h91.196
SRR8749029MeJA induced 9h56.068
SRR8749030Uninduced32.142
SRR8749031Uninduced23.741
SRR8749032Uninduced30.347

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.822
SRR8400027Control-Root16.952

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved