Gene detail information of Glyur000908s00027283.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57300.32.00E-106S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRKHN38004.14.26E-1642-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Glycine soja]
COGYP_004678711.19.00E-78ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Hyphomicrobium sp. MC1]
Swissprottr|Q9LVC8|COQ5_ARATH1.00E-1322-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (Precursor)
trEMBLtr|I1KVG9|I1KVG9_SOYBN2.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22890.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009088583990423-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06127COQ5 EC:2.1.1.201 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

molecular_function

GO:0008168  methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000908s00027283.1PF01209.13Ubie_methyltran422881.70E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.108
SRR1783600control17.124
SRR1783602moderate drought stress19.832
SRR1811619moderate drought stress20.640

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.807
DRR006520Root Summer glycyrrhizin high producing strain31.907
DRR006521Root Winter glycyrrhizin high producing strain23.174
DRR006522Root Winter glycyrrhizin high producing strain23.705
DRR006523Root Summer glycyrrhizin low producing strain30.873
DRR006524Root Summer glycyrrhizin low producing strain31.300
DRR006525Leaf Summer glycyrrhizin high producing strain22.918
DRR006526Leaf Summer glycyrrhizin high producing strain22.697

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.485
SRR2868004Drought Stress(Tissue:root)29.295
SRR2967015Control (Tissue:root)25.625

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.209
SRR9715740Leave20.435
SRR9715741Leave17.484
SRR9715739Root17.484
SRR9715742Root18.533
SRR9715743Root16.554

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h97.052
SRR8749028MeJA induced 9h62.742
SRR8749029MeJA induced 9h110.577
SRR8749030Uninduced73.184
SRR8749031Uninduced59.598
SRR8749032Uninduced78.069

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.508
SRR8400027Control-Root40.538

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved