Gene detail information of Glyur000909s00031010.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44550.1 | 4.00E-37 | fatty acid reductase 5 |
| NR | XP_004490308.1 | 5.88E-109 | PREDICTED: fatty acyl-CoA reductase 8-like [Cicer arietinum] |
| COG | YP_001537828.1 | 8.00E-13 | hypothetical protein Sare_3013 [Salinispora arenicola CNS-205] |
| Swissprot | tr|Q93ZB9|FACR3_ARATH | 2.00E-52 | Fatty acyl-CoA reductase 3 |
| trEMBL | tr|I1LKT9|I1LKT9_SOYBN | 5.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G19190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00909 | 92527 | 101290 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13356 | FAR | EC:1.2.1.84 | Cutin, suberine and wax biosynthesis | map00073 |
| Peroxisome | map04146 | |||
| Longevity regulating pathway - worm | map04212 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000909s00031010.1 | PF07993.7 | NAD_binding_4 | 10 | 167 | 1.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.037 |
| SRR1783600 | control | 0.046 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.157 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.683 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.462 |
| SRR2967015 | Control (Tissue:root) | 0.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.876 |
| SRR9715740 | Leave | 1.636 |
| SRR9715741 | Leave | 1.563 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.260 |
| SRR8749028 | MeJA induced 9h | 0.705 |
| SRR8749029 | MeJA induced 9h | 0.947 |
| SRR8749030 | Uninduced | 4.806 |
| SRR8749031 | Uninduced | 3.016 |
| SRR8749032 | Uninduced | 1.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.114 |
| SRR8400027 | Control-Root | 0.308 |