Gene detail information of Glyur000910s00020572.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50430.10Ergosterol biosynthesis ERG4/ERG24 family
NRXP_004507556.10PREDICTED: 7-dehydrocholesterol reductase-like [Cicer arietinum]
COGYP_004651916.18.00E-1647-dehydrocholesterol reductase [Parachlamydia acanthamoebae UV-7]
Swissprottr|Q9LDU6|ST7R_ARATH07-dehydrocholesterol reductase
trEMBLtr|V7AQL6|V7AQL6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07849.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009103694042815-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00213DHCR7 EC:1.3.1.21 Steroid biosynthesis map00100


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016628  oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000910s00020572.1PF01222.12ERG4_ERG24624364.00E-84


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.517
SRR1783600control56.813
SRR1783602moderate drought stress49.767
SRR1811619moderate drought stress49.738

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain45.319
DRR006520Root Summer glycyrrhizin high producing strain44.593
DRR006521Root Winter glycyrrhizin high producing strain23.597
DRR006522Root Winter glycyrrhizin high producing strain23.062
DRR006523Root Summer glycyrrhizin low producing strain44.383
DRR006524Root Summer glycyrrhizin low producing strain44.677
DRR006525Leaf Summer glycyrrhizin high producing strain26.123
DRR006526Leaf Summer glycyrrhizin high producing strain25.874

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)88.189
SRR2868004Drought Stress(Tissue:root)72.009
SRR2967015Control (Tissue:root)71.335

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave57.967
SRR9715740Leave50.520
SRR9715741Leave63.630
SRR9715739Root34.810
SRR9715742Root38.984
SRR9715743Root39.495

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h62.005
SRR8749028MeJA induced 9h79.044
SRR8749029MeJA induced 9h48.400
SRR8749030Uninduced35.047
SRR8749031Uninduced15.185
SRR8749032Uninduced25.715

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root93.714
SRR8400027Control-Root99.405

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved