Gene detail information of Glyur000910s00020577.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57330.11.00E-125Galactose mutarotase-like superfamily protein
NRXP_003529490.10PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Glycine max]
COGYP_002355684.12.00E-61aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI2.00E-167Putative glucose-6-phosphate 1-epimerase
trEMBLtr|K7KYT6|K7KYT6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G00510.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009108534788605+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000910s00020577.1PF01263.15Aldose_epim202922.10E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.202
SRR1783600control7.317
SRR1783602moderate drought stress7.465
SRR1811619moderate drought stress7.507

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.496
DRR006520Root Summer glycyrrhizin high producing strain7.296
DRR006521Root Winter glycyrrhizin high producing strain4.108
DRR006522Root Winter glycyrrhizin high producing strain3.673
DRR006523Root Summer glycyrrhizin low producing strain3.073
DRR006524Root Summer glycyrrhizin low producing strain2.913
DRR006525Leaf Summer glycyrrhizin high producing strain0.334
DRR006526Leaf Summer glycyrrhizin high producing strain0.243

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.506
SRR2868004Drought Stress(Tissue:root)6.732
SRR2967015Control (Tissue:root)5.409

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.071
SRR9715740Leave0.332
SRR9715741Leave0.195
SRR9715739Root2.340
SRR9715742Root4.468
SRR9715743Root4.629

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.278
SRR8749028MeJA induced 9h4.018
SRR8749029MeJA induced 9h3.326
SRR8749030Uninduced2.429
SRR8749031Uninduced1.349
SRR8749032Uninduced0.958

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.861
SRR8400027Control-Root11.083

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved