Gene detail information of Glyur000910s00020580.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51660.14.00E-123mitogen-activated protein kinase kinase 4
NRXP_003604135.10Mitogen-activated protein kinase kinase [Medicago truncatula]
COGYP_006416616.11.00E-31serine/threonine protein kinase [Aequorivita sublithincola DSM 14238]
Swissprottr|O80397|M2K4_ARATH3.00E-164Mitogen-activated protein kinase kinase 4
trEMBLtr|G7JVJ5|G7JVJ5_MEDTR0MAP kinase kinase {ECO:0000313|EMBL:AES86332.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00910104124105272-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13413MKK4_5 EC:2.7.12.2 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000910s00020580.1PF00069.20Pkinase1013552.30E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control90.501
SRR1783600control89.292
SRR1783602moderate drought stress77.267
SRR1811619moderate drought stress71.210

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain150.684
DRR006520Root Summer glycyrrhizin high producing strain150.922
DRR006521Root Winter glycyrrhizin high producing strain54.609
DRR006522Root Winter glycyrrhizin high producing strain53.442
DRR006523Root Summer glycyrrhizin low producing strain167.476
DRR006524Root Summer glycyrrhizin low producing strain155.472
DRR006525Leaf Summer glycyrrhizin high producing strain88.467
DRR006526Leaf Summer glycyrrhizin high producing strain88.737

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.541
SRR2868004Drought Stress(Tissue:root)116.768
SRR2967015Control (Tissue:root)95.855

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave259.752
SRR9715740Leave261.365
SRR9715741Leave280.931
SRR9715739Root572.225
SRR9715742Root330.781
SRR9715743Root383.351

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h90.333
SRR8749028MeJA induced 9h78.866
SRR8749029MeJA induced 9h70.669
SRR8749030Uninduced76.404
SRR8749031Uninduced45.580
SRR8749032Uninduced76.325

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root125.151
SRR8400027Control-Root164.619

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved