Gene detail information of Glyur000911s00029409.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006578207.1 | 2.36E-52 | PREDICTED: protein CUP-SHAPED COTYLEDON 2-like isoform X3 [Glycine max] |
| trEMBL | tr|I1JUQ5|I1JUQ5_SOYBN | 3.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G08320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00911 | 38953 | 39657 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.774 |
| SRR1783600 | control | 27.643 |
| SRR1783602 | moderate drought stress | 19.882 |
| SRR1811619 | moderate drought stress | 19.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.158 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.154 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 19.265 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.033 |
| SRR2967015 | Control (Tissue:root) | 22.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 1.437 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 17.066 |
| SRR9715742 | Root | 15.279 |
| SRR9715743 | Root | 17.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.646 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 46.472 |
| SRR8400027 | Control-Root | 46.155 |