Gene detail information of Glyur000914s00025715.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18950.18.00E-175Integrin-linked protein kinase family
NRXP_004485951.10PREDICTED: probable serine/threonine-protein kinase DDB_G0271682-like [Cicer arietinum]
COGYP_001958461.14.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-41Serine/threonine-protein kinase HT1
trEMBLtr|A0A072VEQ0|A0A072VEQ0_MEDTR0Integrin-linked kinase family protein {ECO:0000313|EMBL:KEH36655.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009143133537503+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000914s00025715.1PF12796.2Ank_2431313.50E-17
Glyur000914s00025715.1PF00069.20Pkinase1654072.00E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.841
SRR1783600control18.026
SRR1783602moderate drought stress17.085
SRR1811619moderate drought stress17.016

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.444
DRR006520Root Summer glycyrrhizin high producing strain23.215
DRR006521Root Winter glycyrrhizin high producing strain22.115
DRR006522Root Winter glycyrrhizin high producing strain21.428
DRR006523Root Summer glycyrrhizin low producing strain55.087
DRR006524Root Summer glycyrrhizin low producing strain54.676
DRR006525Leaf Summer glycyrrhizin high producing strain18.639
DRR006526Leaf Summer glycyrrhizin high producing strain18.324

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.448
SRR2868004Drought Stress(Tissue:root)72.855
SRR2967015Control (Tissue:root)62.459

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave65.672
SRR9715740Leave33.274
SRR9715741Leave92.969
SRR9715739Root19.686
SRR9715742Root38.425
SRR9715743Root34.556

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.802
SRR8749028MeJA induced 9h64.844
SRR8749029MeJA induced 9h49.380
SRR8749030Uninduced137.565
SRR8749031Uninduced160.476
SRR8749032Uninduced73.553

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root46.234
SRR8400027Control-Root46.909

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved