Gene detail

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Gene detail information of Glyur000917s00030711.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G52830.1	5.00E-25	WRKY DNA-binding protein 27
NR	KHN09281.1	6.56E-88	Putative WRKY transcription factor 27 [Glycine soja]
Swissprot	tr\|Q9FLX8\|WRK27_ARATH	8.00E-34	Probable WRKY transcription factor 27
trEMBL	tr\|K7MHZ9\|K7MHZ9_SOYBN	2.00E-88	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G29561.1}

Sequence

Transcript Sequence

>Glyur000917s00030711.1
ATGTCTCATGAGGATTGGGATCTCTTTGCCATAGTGAGAAGCTGCAAAGCTGCAACCTTTACTACTCCTACCACCACTACACAAACCCCACCAACCAATACTAGATCCCCTCATCAAAACACCACAAAATTGGAACCTTTACAACCCAATATTGTGCAACCTAAAACAAATGGGTTCCTAGAGCTACACCAATTGCTGGTGAACAACTTCAACCCCACCACCACCACTACCACTACCACTACCATTGCCACTACTAGCACTGGTGGTAATTGTGGCATCAATCCCAATTCCACTACTTTTTCTGACCTCACTGGAGTACAACATAAGATGCAGCAGCAAGGTCTCACAAACTTCACCTCCTTTGGAGCCTCAACTACTAGTTTTGACAGATTCCATCACCAACAACAGCAGAAACCTCAACCCACAGAACAACATCAACAACAACAACAAGAAGAGGCCATTAATCAACTACCCCTTCAAGTTATACCCCAAACCAATTATATGGTTTTACAGAACACACAACCACAAACACCCAGATCAAGAAAAAGAAAAAGTCAACAGAAGAAAATGGTGTGCCATGTGACCGCAGATAACCTCTCAGCTGATTTGTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGCGAGAAAGCAAGTAGAGCGAAGCACAACCGACCCGAACATGTTCATCGTGACATACACCGGAGATCACAAGCACGCTAAACCGGTTCACCGGAACTCCCTTGCCGGAAGCATCCGGAACAAGCCANCCACGACCCGTTTACCTGCCGCCCCAGAAACCGGGTCACCCCAGAACGCGGGGAGTTCGTCAAGCTCAGTGTTGCGGTCTGGTCCGCCGGAGAACGGCGAACCCGAATGCCCGGACCCGGATTTAAAACCCGATGACGAGGACGACGACGTTTTGATACCCAATATGGCTGTCATGTCGGACGCCTCCTTCCTATTGGGGTTGAACCACTTCGACAGTGACGCCAAGCCCTCGGATGGGTCAGATCCGAATAGCGTGCCCGGGTTTGACCCGAATATCTTGTCTGGTCCAGGTCTTCAGGAAGTATAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00917	64944	66514	+

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000917s00030711.1	PF03106.10	WRKY	216	241	2.10E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.273
SRR1783600	control	0.344
SRR1783602	moderate drought stress	0.104
SRR1811619	moderate drought stress	0.089

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.292
DRR006520	Root Summer glycyrrhizin high producing strain	0.397
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.376
DRR006524	Root Summer glycyrrhizin low producing strain	0.356
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.012
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.220

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.665
SRR2868004	Drought Stress(Tissue:root)	1.342
SRR2967015	Control (Tissue:root)	1.518

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.336
SRR9715740	Leave	0.994
SRR9715741	Leave	0.135
SRR9715739	Root	0.527
SRR9715742	Root	0.078
SRR9715743	Root	0.222

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.538
SRR8749028	MeJA induced 9h	0.620
SRR8749029	MeJA induced 9h	0.265
SRR8749030	Uninduced	0.089
SRR8749031	Uninduced	0.136
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.913
SRR8400027	Control-Root	0.288