Gene detail

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Gene detail information of Glyur000920s00028988.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G14390.1	4.00E-156	Leucine-rich repeat protein kinase family protein
NR	XP_006573097.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max]
COG	YP_004775215.1	2.00E-15	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9M9S4\|Y1143_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 (Precursor)
trEMBL	tr\|I1J5M1\|I1J5M1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G05090.1}

Sequence

Transcript Sequence

>Glyur000920s00028988.1
ATGAAGAACTTCTTGGTTTCTTTATATTACTTGTTTCCTGCAATCATCCTTGTGCTGCTCACTCCAATTCCTAGTGCACAACTAACAACAAGTGAGAACAGAATCCTTCTCAAAGTTCAGAANCTTCTTGAATACCCTCAAGTTCTTCAAGGATGGACCAACCTCACCAACTTCTGCAACCTCCCTCCCTCACCTTCTCTCAAGATTGTGTGCTCAAATGGCCATGTAACCGAATTAACTGTCATTGGAAACAAGTGCTCCCCACCAACTCTTTCACAAAGATTCTCCATTGATTCTTTCTTTACTGTCTTGACAAAGCTCTCCAATATGAAGGTTTTGTCACTGGTGTCACTTGGTTTGTGGGGTCCTTTACCATCCAAGATTAGCAGGTTAAGGTTGCTTCAAGTGCTCAACATTACCTCAAATTTCATTCATGGGGAAATCCCACCATCAATCACCTCTCTGAAGAATCTTAAAAGTCTTGTTTTGGCTGATAATCTGTTTAATGGGAGTGTTCCTAATCTCACAAGACTAGCCTCTCTTGAAGAGCTCAATTTGGGTTTCAACAAATTAGGCCCTAAATTCCCTTCAATGTGCAACCACAACAACAACAATCTTGTGAGGATTATTATCNTGAGAAACAATTCATTGAGGTGTCAAATTCCACACCAACTCATGAACCTTGATAAACTTGAGCTATTTGACATCTCTTCCAATGAAATATTTGGAAACATCCCATCATTTATTTTCTCTCTTCCTTCCCTCAAGTACCTAAACTTGGCTTCNAACCAACTTAGTGGTTCCCTTTCTGTGAATACATCATGTGGTTCGGCTCTAACATTTGTTGATATCTCACACAACCTCCTGGTAGGAAAATTGCCACCCTGCATTGGTTCAAAGTCATCAAATCGAACAACACTATATTCTGGTAATTGTTTGGATTCAACCAGAAGATTCAATGATCAAGATCAACATCCATCTTCATATTGCAAGAAAGAGGAGGCCTTAGCTGTTGAGCCACCACTTAAAAGNCAGAAGAAGGAATCGAAGATGCAACTAGGCCTAGTACTTGGTATCATTGGAGGTGTTGTTGGAATTCCAGTGCTTCTGGTTCTACTAATTCTTTACCTTTTGAGGAAGTCCAAAGCACTGAAAGCAGAAAAAGCAGATAGTTACATAGATAGATCTGTTGATGATAAATTTTCTGTCCCTGCACATCCAAGACCAAATATTAATGCAATGGAAATAGGGGGTGCTCCTCAGCTAATGAGGCTATCTGCAATTGGATTCCCACCATACAGCATTTTCACATTAGAAGAAATTGAAGATGCAACTAACAACTTTGACCCTTCAAATCTAATAGGAGAAGGATCACAGGGACAGCTATATAAAGGTAGGCTCAGTGATGGTTCAATGGTCATGGTTAATTGTGTGAAACTAAAGCAGAAGAGTTTGTCCAAAACCAATGNTCATCAGAACTTGAAGGTATTACCTTATTTAAGGCACAGGCATTTAGTGAGTGTTCTAGGACACTGTGCCATTTCTTATCAGGACCGTCCCCAAATGACAAGCATGATATTCATTGTATTTGAGCACATCTCATCAAACGTGTCACTGAGGGATCATCTTACAGATAGGAGAAGAAAGGAAATGCTGAAGTGGCCACGGAGAATGGCAATCAGCACAGGCATTGCAAGAGGAATCCAGTTGTTACACACGGGGGTTAAGCCTGGCATATTTGGCAACAACATAAAGATTGAGAACATTCTGAAACTTAATGAACGAAGTGCCCACAATCACATTGGCAGCACTAATGATGCAGAAAAGGAAGACATCTATCAGTTAGGTGTTATTCTACTCCAAGTTATCACTGGCAAACTAATTACATCTTCTAGTGAAGTAGAGGAGTTGAAGTATGAGCTGGAGAGAGGTTTATCTGAAGATGCATCACCAACAGTACTNAGGGGTGCAACCGATTCTTCCCTCCAGGGAACTTATAAATATGAATCATTGAAGACTGTGGTTCAGATCACCATCAATTGTCTCAGCAAGGTTTCGAGTAATCGCCCTTCAATAGAGGATATACTCTGGAATTTGCAGTACTCAATGCAAGTTCAAGAGGCCAGGGCCAGCAGTGGAAGCTTCAAGATAATAAAAATGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00920	73213	76538	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000920s00028988.1	PF07714.12	Pkinase_Tyr	452	573	2.80E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.524
SRR1783600	control	1.498
SRR1783602	moderate drought stress	0.480
SRR1811619	moderate drought stress	0.458

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.694
DRR006520	Root Summer glycyrrhizin high producing strain	0.694
DRR006521	Root Winter glycyrrhizin high producing strain	0.794
DRR006522	Root Winter glycyrrhizin high producing strain	0.760
DRR006523	Root Summer glycyrrhizin low producing strain	0.204
DRR006524	Root Summer glycyrrhizin low producing strain	0.210
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.561
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.555

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.987
SRR2868004	Drought Stress(Tissue:root)	2.132
SRR2967015	Control (Tissue:root)	3.245

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.058
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.016
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.252
SRR8400027	Control-Root	0.305