Gene detail information of Glyur000925s00020311.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32120.1 | 2.00E-151 | Galactosyltransferase family protein |
| NR | XP_004498753.1 | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 10-like [Cicer arietinum] |
| Swissprot | tr|Q94A05|B3GTA_ARATH | 0 | Probable beta-1,3-galactosyltransferase 10 |
| trEMBL | tr|I1M9H1|I1M9H1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G14000.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00925 | 82186 | 87605 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000925s00020311.1 | PF13334.1 | DUF4094 | 22 | 99 | 3.10E-12 |
| Glyur000925s00020311.1 | PF01762.16 | Galactosyl_T | 132 | 325 | 6.60E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.396 |
| SRR1783600 | control | 22.468 |
| SRR1783602 | moderate drought stress | 15.863 |
| SRR1811619 | moderate drought stress | 15.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.736 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.529 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.633 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 40.874 |
| SRR2868004 | Drought Stress(Tissue:root) | 33.152 |
| SRR2967015 | Control (Tissue:root) | 33.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 21.798 |
| SRR9715740 | Leave | 26.194 |
| SRR9715741 | Leave | 27.332 |
| SRR9715739 | Root | 4.756 |
| SRR9715742 | Root | 16.240 |
| SRR9715743 | Root | 12.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.323 |
| SRR8749028 | MeJA induced 9h | 12.805 |
| SRR8749029 | MeJA induced 9h | 9.649 |
| SRR8749030 | Uninduced | 11.342 |
| SRR8749031 | Uninduced | 6.076 |
| SRR8749032 | Uninduced | 5.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 35.762 |
| SRR8400027 | Control-Root | 39.094 |