Gene detail information of Glyur000926s00019317.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72680.13.00E-151cinnamyl-alcohol dehydrogenase
NRXP_004485621.10PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like isoform X1 [Cicer arietinum]
COGNP_386798.13.00E-103zinc-type alcohol dehydrogenase [Sinorhizobium meliloti 1021]
Swissprottr|Q9CAI3|CADH1_ARATH0Probable cinnamyl alcohol dehydrogenase 1
trEMBLtr|G7IS81|G7IS81_MEDTR0Cinnamyl alcohol dehydrogenase-like protein {ECO:0000313|EMBL:AES63541.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00926955417434+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00083E1.1.1.195 EC:1.1.1.195 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000926s00019317.1PF08240.7ADH_N701547.30E-15
Glyur000926s00019317.1PF00107.21ADH_zinc_N1933192.00E-17
Glyur000926s00019317.1PF08240.7ADH_N3905034.30E-24
Glyur000926s00019317.1PF00107.21ADH_zinc_N5486692.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.369
SRR1783600control8.401
SRR1783602moderate drought stress18.212
SRR1811619moderate drought stress18.079

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.989
DRR006520Root Summer glycyrrhizin high producing strain32.722
DRR006521Root Winter glycyrrhizin high producing strain31.128
DRR006522Root Winter glycyrrhizin high producing strain30.159
DRR006523Root Summer glycyrrhizin low producing strain28.568
DRR006524Root Summer glycyrrhizin low producing strain28.356
DRR006525Leaf Summer glycyrrhizin high producing strain10.218
DRR006526Leaf Summer glycyrrhizin high producing strain10.169

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.745
SRR2868004Drought Stress(Tissue:root)27.169
SRR2967015Control (Tissue:root)27.106

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.059
SRR9715740Leave22.916
SRR9715741Leave19.816
SRR9715739Root10.848
SRR9715742Root22.416
SRR9715743Root18.354

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.674
SRR8749028MeJA induced 9h23.586
SRR8749029MeJA induced 9h15.610
SRR8749030Uninduced20.516
SRR8749031Uninduced14.552
SRR8749032Uninduced15.339

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.480
SRR8400027Control-Root16.979

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved