Gene detail information of Glyur000926s00019328.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33650.10dynamin-related protein 3A
NRXP_003593276.10Dynamin-related protein 3A [Medicago truncatula]
Swissprottr|Q8S944|DRP3A_ARATH0Dynamin-related protein 3A
trEMBLtr|G7IS66|G7IS66_MEDTR0Dynamin 3A-like protein {ECO:0000313|EMBL:AES63527.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009266491173500-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17065DNM1L EC:3.6.5.5 TNF signaling pathway map04668
Mitophagy - yeastmap04139
Apoptosis - flymap04214
NOD-like receptor signaling pathwaymap04621


Gene Ontology

molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000926s00019328.1PF00350.18Dynamin_N512271.50E-53
Glyur000926s00019328.1PF01031.15Dynamin_M2365281.70E-101
Glyur000926s00019328.1PF02212.13GED6517413.50E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.202
SRR1783600control18.925
SRR1783602moderate drought stress25.133
SRR1811619moderate drought stress24.571

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.827
DRR006520Root Summer glycyrrhizin high producing strain22.377
DRR006521Root Winter glycyrrhizin high producing strain17.531
DRR006522Root Winter glycyrrhizin high producing strain17.028
DRR006523Root Summer glycyrrhizin low producing strain21.180
DRR006524Root Summer glycyrrhizin low producing strain20.801
DRR006525Leaf Summer glycyrrhizin high producing strain12.797
DRR006526Leaf Summer glycyrrhizin high producing strain12.085

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.089
SRR2868004Drought Stress(Tissue:root)31.564
SRR2967015Control (Tissue:root)32.941

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.207
SRR9715740Leave22.710
SRR9715741Leave25.251
SRR9715739Root9.736
SRR9715742Root31.085
SRR9715743Root26.186

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.844
SRR8749028MeJA induced 9h33.273
SRR8749029MeJA induced 9h18.928
SRR8749030Uninduced21.052
SRR8749031Uninduced13.830
SRR8749032Uninduced14.585

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.339
SRR8400027Control-Root35.132

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved