Gene detail information of Glyur000926s00019330.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38040.1 | 8.00E-137 | Exostosin family protein |
| NR | XP_007148357.1 | 0 | hypothetical protein PHAVU_006G201500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FFN2|GLYT3_ARATH | 4.00E-74 | Probable glycosyltransferase At5g03795 |
| trEMBL | tr|V7BUV2|V7BUV2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW20351.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00926 | 75389 | 78237 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000926s00019330.1 | PF03016.10 | Exostosin | 116 | 394 | 1.10E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.066 |
| SRR1783600 | control | 0.026 |
| SRR1783602 | moderate drought stress | 0.002 |
| SRR1811619 | moderate drought stress | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.306 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.067 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.212 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.082 |
| SRR2967015 | Control (Tissue:root) | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.010 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.562 |
| SRR8749028 | MeJA induced 9h | 0.788 |
| SRR8749029 | MeJA induced 9h | 0.740 |
| SRR8749030 | Uninduced | 0.006 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.096 |
| SRR8400027 | Control-Root | 0.108 |