Gene detail information of Glyur000931s00028705.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44810.1 | 6.00E-142 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003533563.2 | 0 | PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Glycine max] |
| COG | YP_003889645.1 | 4.00E-11 | lipase class 3 [Cyanothece sp. PCC 7822] |
| Swissprot | tr|Q948R1|PLA11_ARATH | 1.00E-177 | Phospholipase A(1) DAD1, chloroplastic (Precursor) |
| trEMBL | tr|K7MUM4|K7MUM4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G48640.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00931 | 22432 | 23757 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16818 | DAD1 | EC:3.1.1.32 | Glycerophospholipid metabolism | map00564 |
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000931s00028705.1 | PF01764.20 | Lipase_3 | 201 | 354 | 1.60E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.028 |
| SRR1783600 | control | 0.026 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.210 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.385 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.277 |
| SRR2967015 | Control (Tissue:root) | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.512 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.192 |
| SRR9715739 | Root | 0.818 |
| SRR9715742 | Root | 0.305 |
| SRR9715743 | Root | 0.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.038 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.180 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.131 |
| SRR8400027 | Control-Root | 0.151 |