Gene detail information of Glyur000933s00028073.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54610.2 | 2.00E-122 | Protein kinase superfamily protein |
| NR | XP_007137578.1 | 0 | hypothetical protein PHAVU_009G138300g [Phaseolus vulgaris] |
| COG | YP_006979764.1 | 2.00E-24 | kinase domain-containing protein [Propionibacterium acidipropionici ATCC 4875] |
| Swissprot | tr|Q9ZVM9|Y1461_ARATH | 6.00E-150 | Probable serine/threonine-protein kinase At1g54610 |
| trEMBL | tr|K7KLK4|K7KLK4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G39569.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00933 | 59849 | 64952 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.5.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000933s00028073.1 | PF00069.20 | Pkinase | 144 | 426 | 7.60E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.360 |
| SRR1783600 | control | 0.346 |
| SRR1783602 | moderate drought stress | 3.333 |
| SRR1811619 | moderate drought stress | 3.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.970 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.064 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.511 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.242 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.036 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.050 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.570 |
| SRR9715743 | Root | 0.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.031 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.008 |
| SRR8749031 | Uninduced | 0.012 |
| SRR8749032 | Uninduced | 0.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.139 |
| SRR8400027 | Control-Root | 0.151 |