Gene detail information of Glyur000936s00037097.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13640.1 | 2.00E-30 | phospholipid:diacylglycerol acyltransferase |
| NR | XP_007132366.1 | 1.36E-38 | hypothetical protein PHAVU_011G088800g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FNA9|PDAT1_ARATH | 3.00E-35 | Phospholipid:diacylglycerol acyltransferase 1 |
| trEMBL | tr|V7AGF2|V7AGF2_PHAVU | 5.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:ESW04360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00936 | 82229 | 82772 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00679 | E2.3.1.158 | EC:2.3.1.158 | Glycerolipid metabolism | map00561 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000936s00037097.1 | PF02450.10 | LCAT | 5 | 77 | 1.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.500 |
| SRR1811619 | moderate drought stress | 1.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.311 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.258 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.846 |
| SRR2967015 | Control (Tissue:root) | 6.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.022 |
| SRR9715740 | Leave | 0.763 |
| SRR9715741 | Leave | 0.555 |
| SRR9715739 | Root | 0.134 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.016 |
| SRR8749028 | MeJA induced 9h | 0.544 |
| SRR8749029 | MeJA induced 9h | 0.221 |
| SRR8749030 | Uninduced | 0.258 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.049 |
| SRR8400027 | Control-Root | 0.356 |