Gene detail information of Glyur000940s00031346.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40760.10glucose-6-phosphate dehydrogenase 6
NRXP_004491740.10PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isoform X1 [Cicer arietinum]
COGYP_005442949.16.00E-109glucose-6-phosphate 1-dehydrogenase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|Q42919|G6PD_MEDSA0Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform
trEMBLtr|G7KS28|G7KS28_MEDTR0Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|RuleBase:RU000497}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009401483122497-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00036G6PD, zwf EC:1.1.1.49 1.1.1.363 Carbon metabolism map01200
Pentose phosphate pathwaymap00030
Glutathione metabolismmap00480
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006006  glucose metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004345  glucose-6-phosphate dehydrogenase activity

GO:0050661  NADP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000940s00031346.2PF00479.17G6PD_N342225.00E-63
Glyur000940s00031346.2PF02781.11G6PD_C2244486.70E-104


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control61.783
SRR1783600control61.303
SRR1783602moderate drought stress47.808
SRR1811619moderate drought stress47.648

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.560
DRR006520Root Summer glycyrrhizin high producing strain38.055
DRR006521Root Winter glycyrrhizin high producing strain27.865
DRR006522Root Winter glycyrrhizin high producing strain27.441
DRR006523Root Summer glycyrrhizin low producing strain24.127
DRR006524Root Summer glycyrrhizin low producing strain23.870
DRR006525Leaf Summer glycyrrhizin high producing strain5.023
DRR006526Leaf Summer glycyrrhizin high producing strain4.982

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)72.454
SRR2868004Drought Stress(Tissue:root)95.556
SRR2967015Control (Tissue:root)76.227

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.920
SRR9715740Leave14.280
SRR9715741Leave29.708
SRR9715739Root27.054
SRR9715742Root77.845
SRR9715743Root62.428

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.376
SRR8749028MeJA induced 9h50.096
SRR8749029MeJA induced 9h22.705
SRR8749030Uninduced122.939
SRR8749031Uninduced137.934
SRR8749032Uninduced60.640

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root111.650
SRR8400027Control-Root96.143

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved