Gene detail information of Glyur000942s00027148.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35390.11.00E-75Leucine-rich repeat protein kinase family protein
NRXP_004488972.10PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum]
COGYP_004429344.16.00E-19leucine-rich repeat-containing protein [Krokinobacter sp. 4H-3-7-5]
Swissprottr|C0LGU0|RLK_ARATH1.00E-116Probable LRR receptor-like serine/threonine-protein kinase RLK (Precursor)
trEMBLtr|K7M8N2|K7M8N2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G00270.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009428031482521+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000942s00027148.1PF08263.7LRRNT_242861.30E-06
Glyur000942s00027148.1PF13855.1LRR_81161734.00E-08
Glyur000942s00027148.1PF00560.28LRR_12112310.55
Glyur000942s00027148.1PF07714.12Pkinase_Tyr3354783.40E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.004
SRR1783600control3.479
SRR1783602moderate drought stress0.777
SRR1811619moderate drought stress0.860

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.555
DRR006520Root Summer glycyrrhizin high producing strain0.579
DRR006521Root Winter glycyrrhizin high producing strain0.033
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.583
DRR006524Root Summer glycyrrhizin low producing strain1.895
DRR006525Leaf Summer glycyrrhizin high producing strain0.630
DRR006526Leaf Summer glycyrrhizin high producing strain0.479

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.185
SRR2868004Drought Stress(Tissue:root)0.018
SRR2967015Control (Tissue:root)0.103

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.403
SRR9715740Leave0.286
SRR9715741Leave1.123
SRR9715739Root34.443
SRR9715742Root11.863
SRR9715743Root16.593

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.292
SRR8749028MeJA induced 9h21.986
SRR8749029MeJA induced 9h30.678
SRR8749030Uninduced6.026
SRR8749031Uninduced4.812
SRR8749032Uninduced10.166

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.622
SRR8400027Control-Root3.767

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved