Gene detail information of Glyur000945s00028134.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34131.1 | 9.00E-91 | UDP-glucosyl transferase 73B3 |
| NR | BAC78438.1 | 0 | isoflavonoid glucosyltransferase [Glycyrrhiza echinata] |
| COG | YP_004904106.1 | 2.00E-08 | putative macrolide glycosyltransferase [Kitasatospora setae KM-6054] |
| Swissprot | tr|Q9AT54|SCGT_TOBAC | 2.00E-123 | Scopoletin glucosyltransferase |
| trEMBL | tr|Q7XZD0|Q7XZD0_GLYEC | 0 | Isoflavonoid glucosyltransferase {ECO:0000313|EMBL:BAC78438.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00945 | 62453 | 63823 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000945s00028134.1 | PF00201.13 | UDPGT | 266 | 389 | 3.80E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.146 |
| SRR1783600 | control | 10.189 |
| SRR1783602 | moderate drought stress | 14.448 |
| SRR1811619 | moderate drought stress | 14.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.786 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.622 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.857 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.084 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.639 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.763 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.889 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.646 |
| SRR2967015 | Control (Tissue:root) | 13.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 30.193 |
| SRR9715740 | Leave | 36.996 |
| SRR9715741 | Leave | 37.876 |
| SRR9715739 | Root | 21.339 |
| SRR9715742 | Root | 14.388 |
| SRR9715743 | Root | 13.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.065 |
| SRR8749028 | MeJA induced 9h | 107.253 |
| SRR8749029 | MeJA induced 9h | 141.139 |
| SRR8749030 | Uninduced | 5.720 |
| SRR8749031 | Uninduced | 24.184 |
| SRR8749032 | Uninduced | 43.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.095 |
| SRR8400027 | Control-Root | 7.914 |