Gene detail information of Glyur000945s00028139.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G31710.10Copper amine oxidase family protein
NRKEH32232.10copper amine oxidase, enzyme domain protein [Medicago truncatula]
COGYP_005086886.11.00E-104tyramine oxidase [Pseudovibrio sp. FO-BEG1]
Swissprottr|Q43077|AMO_PEA0Primary amine oxidase (Precursor)
trEMBLtr|A0A072URB1|A0A072URB1_MEDTR0Amine oxidase {ECO:0000256|RuleBase:RU000672}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009458347887206-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00276AOC3, AOC2, tynA EC:1.4.3.21 Glycine, serine and threonine metabolism map00260
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
beta-Alanine metabolismmap00410
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

biological_process

GO:0009308  amine metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005507  copper ion binding

GO:0008131  primary amine oxidase activity

GO:0048038  quinone binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000945s00028139.1PF02727.11Cu_amine_oxidN2311163.00E-25
Glyur000945s00028139.1PF02728.11Cu_amine_oxidN31242204.90E-26
Glyur000945s00028139.1PF01179.15Cu_amine_oxid2466601.40E-134


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control557.982
SRR1783600control557.576
SRR1783602moderate drought stress137.380
SRR1811619moderate drought stress135.176

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain359.128
DRR006520Root Summer glycyrrhizin high producing strain353.552
DRR006521Root Winter glycyrrhizin high producing strain2.303
DRR006522Root Winter glycyrrhizin high producing strain2.106
DRR006523Root Summer glycyrrhizin low producing strain20.231
DRR006524Root Summer glycyrrhizin low producing strain19.836
DRR006525Leaf Summer glycyrrhizin high producing strain1.906
DRR006526Leaf Summer glycyrrhizin high producing strain2.032

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1697.952
SRR2868004Drought Stress(Tissue:root)550.886
SRR2967015Control (Tissue:root)875.809

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave81.481
SRR9715740Leave0.566
SRR9715741Leave20.135
SRR9715739Root407.346
SRR9715742Root596.128
SRR9715743Root558.968

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.661
SRR8749028MeJA induced 9h17.384
SRR8749029MeJA induced 9h20.904
SRR8749030Uninduced9.128
SRR8749031Uninduced20.748
SRR8749032Uninduced91.498

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root288.992
SRR8400027Control-Root197.930

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved