Gene detail information of Glyur000946s00037886.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24270.31.00E-52aldehyde dehydrogenase 11A3
NRKCW80287.12.28E-66hypothetical protein EUGRSUZ_C016461, partial [Eucalyptus grandis]
COGYP_003307897.18.00E-31aldehyde dehydrogenase [Sebaldella termitidis ATCC 33386]
Swissprottr|P81406|GAPN_PEA3.00E-66NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
trEMBLtr|A0A059CP94|A0A059CP94_EUCGR8.00E-67Uncharacterized protein {ECO:0000313|EMBL:KCW80288.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009469220994820+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00131gapN EC:1.2.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000946s00037886.1PF00171.17Aldedh261381.00E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.329
SRR1783600control5.262
SRR1783602moderate drought stress3.778
SRR1811619moderate drought stress5.072

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.954
DRR006520Root Summer glycyrrhizin high producing strain8.498
DRR006521Root Winter glycyrrhizin high producing strain48.159
DRR006522Root Winter glycyrrhizin high producing strain49.432
DRR006523Root Summer glycyrrhizin low producing strain7.645
DRR006524Root Summer glycyrrhizin low producing strain7.749
DRR006525Leaf Summer glycyrrhizin high producing strain10.171
DRR006526Leaf Summer glycyrrhizin high producing strain10.281

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.678
SRR2868004Drought Stress(Tissue:root)0.288
SRR2967015Control (Tissue:root)0.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.520
SRR9715740Leave1.948
SRR9715741Leave7.131
SRR9715739Root0.241
SRR9715742Root1.318
SRR9715743Root1.400

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.037
SRR8749028MeJA induced 9h0.018
SRR8749029MeJA induced 9h0.016
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.565
SRR8400027Control-Root8.172

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved