Gene detail information of Glyur000947s00021195.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31880.14.00E-119Leucine-rich repeat protein kinase family protein
NRKEH35011.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_001192956.15.00E-13two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q9SKB2|SBIR1_ARATH1.00E-159Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 (Precursor)
trEMBLtr|A0A072UZY2|A0A072UZY2_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH35011.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009477488076817+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000947s00021195.1PF13855.1LRR_81071662.00E-07
Glyur000947s00021195.1PF00069.20Pkinase3544531.20E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.680
SRR1783600control9.575
SRR1783602moderate drought stress6.442
SRR1811619moderate drought stress6.267

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.777
DRR006520Root Summer glycyrrhizin high producing strain34.868
DRR006521Root Winter glycyrrhizin high producing strain0.824
DRR006522Root Winter glycyrrhizin high producing strain0.812
DRR006523Root Summer glycyrrhizin low producing strain38.110
DRR006524Root Summer glycyrrhizin low producing strain37.468
DRR006525Leaf Summer glycyrrhizin high producing strain107.846
DRR006526Leaf Summer glycyrrhizin high producing strain104.978

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.293
SRR2868004Drought Stress(Tissue:root)72.710
SRR2967015Control (Tissue:root)164.107

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave330.178
SRR9715740Leave251.306
SRR9715741Leave406.319
SRR9715739Root121.084
SRR9715742Root312.099
SRR9715743Root269.191

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h67.573
SRR8749028MeJA induced 9h135.580
SRR8749029MeJA induced 9h28.240
SRR8749030Uninduced229.371
SRR8749031Uninduced29.623
SRR8749032Uninduced29.841

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.806
SRR8400027Control-Root27.148

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved