Gene detail information of Glyur000950s00029448.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38650.20galacturonosyltransferase 7
NRXP_004492632.10PREDICTED: probable galacturonosyltransferase 7-like, partial [Cicer arietinum]
COGYP_002770215.12.00E-06hypothetical protein BBR47_07340 [Brevibacillus brevis NBRC 100599]
Swissprottr|Q9ZVI7|GAUT7_ARATH0Probable galacturonosyltransferase 7
trEMBLtr|A2Q3W2|A2Q3W2_MEDTR0Glycosyltransferase family 8 protein {ECO:0000313|EMBL:AES79920.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009501726024832+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000950s00029448.1PF01501.15Glyco_transf_83256208.70E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.923
SRR1783600control25.986
SRR1783602moderate drought stress19.027
SRR1811619moderate drought stress18.821

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.100
DRR006520Root Summer glycyrrhizin high producing strain17.079
DRR006521Root Winter glycyrrhizin high producing strain9.808
DRR006522Root Winter glycyrrhizin high producing strain9.620
DRR006523Root Summer glycyrrhizin low producing strain15.540
DRR006524Root Summer glycyrrhizin low producing strain15.916
DRR006525Leaf Summer glycyrrhizin high producing strain7.689
DRR006526Leaf Summer glycyrrhizin high producing strain7.562

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.020
SRR2868004Drought Stress(Tissue:root)21.430
SRR2967015Control (Tissue:root)22.351

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.189
SRR9715740Leave7.352
SRR9715741Leave7.778
SRR9715739Root1.591
SRR9715742Root9.544
SRR9715743Root7.637

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.048
SRR8749028MeJA induced 9h26.139
SRR8749029MeJA induced 9h15.517
SRR8749030Uninduced5.959
SRR8749031Uninduced4.508
SRR8749032Uninduced3.831

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.793
SRR8400027Control-Root32.063

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved