Gene detail information of Glyur000950s00029453.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01020.10Protein kinase superfamily protein
NRXP_007140016.10hypothetical protein PHAVU_008G077200g [Phaseolus vulgaris]
COGYP_008151634.12.00E-27hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q8GXZ3|Y5102_ARATH0Serine/threonine-protein kinase At5g01020
trEMBLtr|V7B364|V7B364_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW12010.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009505301457277-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000950s00029453.1PF00069.20Pkinase1003703.00E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.865
SRR1783600control28.517
SRR1783602moderate drought stress21.522
SRR1811619moderate drought stress21.622

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.913
DRR006520Root Summer glycyrrhizin high producing strain32.536
DRR006521Root Winter glycyrrhizin high producing strain13.120
DRR006522Root Winter glycyrrhizin high producing strain12.528
DRR006523Root Summer glycyrrhizin low producing strain34.609
DRR006524Root Summer glycyrrhizin low producing strain34.171
DRR006525Leaf Summer glycyrrhizin high producing strain12.944
DRR006526Leaf Summer glycyrrhizin high producing strain12.666

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.612
SRR2868004Drought Stress(Tissue:root)25.955
SRR2967015Control (Tissue:root)28.687

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.056
SRR9715740Leave7.914
SRR9715741Leave8.156
SRR9715739Root35.575
SRR9715742Root20.350
SRR9715743Root23.628

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.947
SRR8749028MeJA induced 9h24.028
SRR8749029MeJA induced 9h17.165
SRR8749030Uninduced9.129
SRR8749031Uninduced4.297
SRR8749032Uninduced7.848

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.327
SRR8400027Control-Root39.780

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved