Gene detail information of Glyur000951s00029021.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.14.00E-105Peroxidase superfamily protein
NRAFK45898.15.61E-177unknown [Lotus japonicus]
Swissprottr|A7NY33|PER4_VITVI4.00E-146Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|I3T056|I3T056_LOTJA2.00E-177Uncharacterized protein {ECO:0000313|EMBL:AFK45898.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009519555487-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000951s00029021.2PF00141.18peroxidase42401.30E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.809
SRR1783600control1.598
SRR1783602moderate drought stress3.677
SRR1811619moderate drought stress4.126

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.174
DRR006520Root Summer glycyrrhizin high producing strain3.166
DRR006521Root Winter glycyrrhizin high producing strain1.194
DRR006522Root Winter glycyrrhizin high producing strain1.060
DRR006523Root Summer glycyrrhizin low producing strain7.776
DRR006524Root Summer glycyrrhizin low producing strain7.407
DRR006525Leaf Summer glycyrrhizin high producing strain21.797
DRR006526Leaf Summer glycyrrhizin high producing strain21.322

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.008
SRR2868004Drought Stress(Tissue:root)10.562
SRR2967015Control (Tissue:root)10.193

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.834
SRR9715740Leave10.106
SRR9715741Leave15.364
SRR9715739Root1.540
SRR9715742Root5.213
SRR9715743Root5.527

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.794
SRR8749028MeJA induced 9h73.835
SRR8749029MeJA induced 9h32.756
SRR8749030Uninduced394.809
SRR8749031Uninduced241.747
SRR8749032Uninduced409.725

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.656
SRR8400027Control-Root3.538

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved