Gene detail information of Glyur000951s00029024.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.12.00E-83Peroxidase superfamily protein
NRNP_001241115.15.14E-171uncharacterized protein LOC100811170 precursor [Glycine max]
Swissprottr|A7NY33|PER4_VITVI1.00E-100Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|C6TKG5|C6TKG5_SOYBN2.00E-171Putative uncharacterized protein {ECO:0000313|EMBL:ACU23405.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009513062642111+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000951s00029024.1PF00141.18peroxidase451193.90E-18
Glyur000951s00029024.1PF00141.18peroxidase1232702.50E-36
Glyur000951s00029024.1PF00141.18peroxidase3253802.90E-11
Glyur000951s00029024.1PF00141.18peroxidase3825198.20E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.219
SRR1783600control0.223
SRR1783602moderate drought stress0.112
SRR1811619moderate drought stress0.116

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.371
DRR006520Root Summer glycyrrhizin high producing strain3.308
DRR006521Root Winter glycyrrhizin high producing strain0.239
DRR006522Root Winter glycyrrhizin high producing strain0.191
DRR006523Root Summer glycyrrhizin low producing strain0.165
DRR006524Root Summer glycyrrhizin low producing strain0.195
DRR006525Leaf Summer glycyrrhizin high producing strain0.750
DRR006526Leaf Summer glycyrrhizin high producing strain0.786

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.559
SRR2868004Drought Stress(Tissue:root)42.763
SRR2967015Control (Tissue:root)38.771

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.031
SRR9715740Leave0.000
SRR9715741Leave0.000
SRR9715739Root0.135
SRR9715742Root0.234
SRR9715743Root0.244

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.927
SRR8749028MeJA induced 9h6.175
SRR8749029MeJA induced 9h1.401
SRR8749030Uninduced2.369
SRR8749031Uninduced0.613
SRR8749032Uninduced0.935

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.568
SRR8400027Control-Root6.021

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved