Gene detail information of Glyur000952s00025630.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56145.15.00E-61Leucine-rich repeat transmembrane protein kinase
NRXP_003610010.10Cysteine-rich receptor-like protein kinase [Medicago truncatula]
COGYP_001958461.11.00E-19hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|C0LGH3|Y5614_ARATH2.00E-67Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor)
trEMBLtr|G7JT83|G7JT83_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES92207.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009523135634421-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000952s00025630.1PF00069.20Pkinase822361.20E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.009
SRR1783600control1.728
SRR1783602moderate drought stress2.283
SRR1811619moderate drought stress2.054

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.087
DRR006520Root Summer glycyrrhizin high producing strain0.086
DRR006521Root Winter glycyrrhizin high producing strain13.616
DRR006522Root Winter glycyrrhizin high producing strain14.528
DRR006523Root Summer glycyrrhizin low producing strain0.368
DRR006524Root Summer glycyrrhizin low producing strain0.388
DRR006525Leaf Summer glycyrrhizin high producing strain0.377
DRR006526Leaf Summer glycyrrhizin high producing strain0.425

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.367
SRR2868004Drought Stress(Tissue:root)1.803
SRR2967015Control (Tissue:root)2.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.441
SRR9715740Leave0.057
SRR9715741Leave0.575
SRR9715739Root0.715
SRR9715742Root0.742
SRR9715743Root0.858

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.656
SRR8749028MeJA induced 9h12.212
SRR8749029MeJA induced 9h16.435
SRR8749030Uninduced10.818
SRR8749031Uninduced8.021
SRR8749032Uninduced16.825

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.559
SRR8400027Control-Root9.960

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved